All functions

alligator_data

Alligator Data

cladocera_data

Cladocera data from Galloway et al 2015.

cosimmr cosimmr-package

cosimmr: An R package for Stable Isotope Mixing Models

cosimmr_ffvb()

Run a cosimmr_input object through the Fixed Form Variational Bayes(FFVB) function

cosimmr_load()

Function to load in cosimmr data and check for errors

geese_data

Geese stable isotope mixing data set

geese_data_day1

A smaller version of the Geese stable isotope mixing data set

iso_data

Isopod Data

plot(<cosimmr_input>)

Plot the cosimmr_input data created from cosimmr_load

plot(<cosimmr_output>)

Plot different features of an object created from cosimmr_ffvb.

plot(<cosimmr_pred_out>)

Plot different features of an object created from cosimmr_ffvb.

posterior_predictive()

Plot the posterior predictive distribution for a cosimmr run

predict(<cosimmr_output>)

Predicts proportion of each source in a mixture, based on values provided for covariates

print(<cosimmr_input>)

Print simmr input object

print(<cosimmr_output>)

Print a simmr output object

prior_viz()

Plot the prior distribution for a cosimmr run

simmr_data_1

A simple fake stable isotope mixing data set

simmr_data_2

A 3-isotope fake stable isotope mixing data set

square_data

An artificial data set used to indicate effect of priors

summary(<cosimmr_output>)

Summarises the output created with cosimmr_ffvb

summary(<cosimmr_pred_out>)

Summarises the output created with cosimmr_ffvb